protein database การใช้

• UniProt Consortium also provides a Metalink for their large protein database.
• RNA-binding protein database has three main specific categories.
• :Searching the NCBI protein database for " histone " gives over 24000 protein sequences.
• Human prion protein, residues 125-228, created from protein database ( PDB ) entry 1QM3.
• Tandem mass spectrometry can produce a peptide sequence tag that can be used to identify a peptide in a protein database.
• The "'Human Protein Reference Database "'( HPRD ) is a protein database accessible through the Internet.
• Mascot then computes a score based on the probability that the peptides from a sample match those in the selected protein database.
• Also the comparison of the whole genome revealed 15 % more hits than from a protein database search ( such as MASCOT ) alone.
• In addition, the Structural Classification of Proteins database has defined the  ribulose phosphate binding superfamily for which this epimerase is a member.
• Another successful project that was started at CPE and maintained there until 2010 was the Structural Classification of Proteins database ( or SCOP ).
• Data on heme protein structure and function has been aggregated into The Heme Protein Database ( HPD ), a secondary database to the Protein Data Bank.
• Right now, RNA-binding protein database ( RBPDB ) contains 1171 RNA-binding proteins from Homo sapiens, Mus musculus, Drosophila melanogaster, and Caenorhabditis elegans.
• The largest protein database in the world, known as the UniProt database ( formerly SwissProt ), has shown reports of molecular mimicry becoming more common with expansion of the database.
• Nearly all of the CPE staff, including those maintaining the Structural Classification of Proteins database, and its infrastructure were incorporated into the MRC Laboratory of Molecular Biology ( LMB ).
• *The Nuclear Compartments : Paraspeckle page on the Nuclear Protein Database, written by Dr . Archa Fox and Dr . Wendy Bickmore, provides a factsheet and links to information on paraspeckle components.
• At the Institute for Systems Biology, the community grid will be used to compute how new genes fold into proteins and then match those shapes against a three-dimensional protein database, looking for similarities.
• Using NASA funding via the Center of Microgravity and Environmental Biology ( recently renamed the Group for Microgravity and Environmental Biology ), she supported a graduate student in the computer science department, who helped to develop a protein database for mapping stress proteins.
• In fact, according to the Structural Classification of Proteins database, only three different folds have been observed for glycosyltransferases Very recently, a new glycosyltransferase fold was identified for the glycosyltransferases involved in the biosynthesis of the NAG-NAM polymer backbone of peptidoglycan.
• Lack of comprehensiveness or data integrity, on the other hand, are associated with some of the open-access crystal structure databases other than the Crystallography Open Database ( COD ), and is " macromolecular open-access counterpart ", the world wide Protein Database.
• Unfortunately, the rate at which new sequences are discovered far exceeds the rate of structure determination  out of more than 7, 400, 000 protein sequences available in the National Center for Biotechnology Information ( NCBI ) nonredundant ( nr ) protein database, fewer than 52, 000 proteins'3D structures have been solved and deposited in the Protein Data Bank, the main repository for structural information on proteins.